4.
Send immediately to the laboratory in securely closed container.
For additional information, please contact the laboratory.
Collection
and Transport of Microbiology Specimens
Correct
specimen collection and transport of clinical specimens to
the laboratory are extremely important for rapid and accurate
identification of significant microorganisms from patient
samples.
Please
send separate test requisitions for each culture.
General
Consideration for Collection and Transport:
- Use
sterile technique and transport to the laboratory as soon
as possible.
- Close
collection containers securely to prevent leaking of sample
during transport. These specimens are biohazards.
- Whenever
possible obtain specimens prior to the administration of
antibiotics.
- Do
not use expired tubes or media for specimen collection.
- Please
write the patient's name on each specimen container.
- Send
specimens in one of the following transport systems:
1. Swabs with transport media (culturettes): eye,
ear, nose, stool, strep screen, throat, wounds- give site.
(Hold at room temperature or refrigerate).
2. Non sterile containers: sputum
3. Sterile containers: body fluids (except blood
and urine, see below).
4. Special transport systems:
Blood-
2, 20 mL vacutainer tubes with Supplemented Peptone Broth.
G.C. Specimens- Urethral discharge or any source:
JEMBEC plates with bag.
Urine- Container with preservative (boric acid) "Boricon"
Parasitology- Special collection kits with Formalin
and PVA
Body Fluid Culture (For PD fluid see Peritoneal Fluid):
Pleural,
pericardial, and synovial fluids must be aspirated aseptically.
The body site should be disinfected with an iodophor prior
to aspiration. Use sterile technique. Inoculate into sterile
tube or container or blood culture media.
Blood Culture:
Disinfect
body site with iodophor prior to venipuncture. Use sterile
technique. Inoculate 2 vacutainer tubes containing 18 mL Supplemented
Peptone Broth (SPB) - 2 mL draw. disinfect top of tubes with
alcohol prior to inoculation. Two sets from separate venipuncture
sites recommended.
Eye, Ear:
Collect
specimen with a culturette swab. After collection, place swab
back into plastic tube. REFRIGERATE OR LEAVE AT ROOM TEMPERATURE.
Fluid:
See
Body Fluid or Peritoneal Fluid
Fungi:
See
Mycology
Environmental (Water and Dialysate) Cultures:
See
separate instructions for use of Millipore Sampler
Genital Culture:
Collect
these specimens using a Culturette swab. The swab may be used
to culture urethral exudate or inflammation of the vaginal
area. While these specimens are not optimal for gonococcal
isolation, the diagnosis of vaginitis or urethritis may be
made by the recovery of other pathogens. Swabs must be stored
at room temperature until transported to the laboratory. If
Gonorrhoeae is suspected, use Test No. 0075, Gonorrhea Culture.
Gonorrhea Cultures:
JEMBEC
plates are provided for the isolation of Neisseria gonorrhoeae
from rectal, pharyngeal, and genital sites. JEMBEC plates
contain antibiotics to allow the isolation of N. gonorrhoeae
from these heavily contaminated areas and must be stored at
refrigerated temperatures before use. However, it is important
that they be at room temperature at the time of inoculation
because cold temperatures inhibit growth of gonococci. Exudate
is obtained with a sterile swab and immediately inoculated
on the JEMBEC agar. Urethral discharge may be collected with
a swab which is then immediately streaked onto the agar surface.
A CO2 atmosphere is necessary to recover neisseria gonorrhoeae.
This may be performed by placing a CO2 generating tablet in
the small well present in the plate. The plate is then sealed
in a plastic bag. No water is needed to activate the tablet.
ONCE SEALED, THE BAG SHOULD BE STORED AT ROOM TEMPERATURE
UNTIL TRANSPORTED TO THE LABORATORY.
Gonorrhea/Chlamydia DNA Probe:
1. Specimen collection swabs and transport media are supplied
by the laboratory. Remove excess mucus from the cervical os
and surrounding mucosa using one of the swabs provided; discard
this swab.
2. Insert the second swab from the collection kit 1.0 - 1.5
cm into the endocervical canal.
3. Rotate the swab 30 seconds in the endocervical canal to
ensure adequate sampling.
4. Withdraw the swab, avoiding any contact with the vaginal
mucosa.
5. Insert this swab into the Gen-Probe transport tube, snap
off the shaft at the score-line, cap the tube, and store at
2 - 25°C until tested.
Mycology (Yeast):
Cultures
for yeast can be submitted on a Culturette. For fluids and
sputum, best results are obtained by submitting the entire
specimen. If dermatophytes are suspected, the specimen should
be submitted in a dry sterile tube.
Nasal Culture:
A
Culturette swab is gently inserted through the nose to the
posterior nasopharynx where it is gently rotated. It should
remain in this position for several seconds. The withdrawal
should be slow to minimize irritation. Place the inoculated
swab into the sterile plastic tube and crush the ampule.
Parasitology Specimens:
Stools
for Ova and Parasites should be shipped in Ova and Parasite
kits- 5 gm minimum of stool in EACH of the paired vials. CLEAR
tape preparation or pinworm paddle is appropriate for submission
of specimens for pinworm examination. Submit intact parasites
(insects or worms) in 70% alcohol.
Peritoneal Fluid or Dialysate Culture:
Disinfect
bag's injection sampling port. Use sterile collection technique.
Inoculate 3 mL each into four vacutainer tubes with SPB (Supplemented
Peptone Broth). Disinfect top of tubes with alcohol prior
to inoculation.
Sputum Culture:
Instruct
the patient to obtain material from a deep cough which is
expectorated into a sterile container. Sputum containers are
best suited for this collection. The volume of specimen need
not be large (3 mL). Once collected, sputum should be refrigerated
until transport. Be sure that the cap is tightly sealed on
the container once the specimen is collected. A leaky container
is a biohazard.
Stool Culture:
Use
Culturette swab. Obtain pea-size feces on swab and place in
culturette.
Throat Culture:
Use
Culturette swab to obtain all types of throat specimens. Rub
the sterile swab firmly over the back of the throat (posterior
pharynx), both tonsils or tonsillar fossa, and any area of
inflammation. Once the specimen is collected, the swab should
be replaced in the plastic tube and the ampule at the base
crushed to wet the swab.
Throat, Group A Strep Screen:
Use
Culturette to obtain specimen for Group A Strep only. Results
take one day versus 2 - 3 days for complete culture.
Urine Culture Screen:
Collect
a "clean-catch" mid stream urine into a paper cup. Immediately
transfer to Boricon tube with Bacteriostatic preservative.
A first morning specimen is preferable and should be refrigerated
until pick-up.
Note:
It is not necessary to collect a specimen for culture in a
sterile cup if the urine is immediately transferred to the
Boricon tube.
Wound Culture:
A superficial wound culture should be collected with a Culturette
swab. After collection, place swab back into plastic tube,
and refrigerate or leave at room temperature until transport.
If the lesion is not open, a sterile needle and syringe should
be employed to remove material. the culturette may be inoculated
with this sample.
Important
Please
note that to comply with new Federal requirements (C.L.I.A.
88). All test requests are to be signed by the ordering
physician and the time and date of the specimen collection
are to be clearly added to the request form.
Note
Reference
Ranges are method dependent and may change if a methodology
changes. Check the final report for all reference ranges.